Insertion junction: CLIP2.060690_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060690
Chromosome:chromosome 7
Location:3535532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336350 (1 of 1) PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTTGAGTGGTGGCGGAGGAGGGCCCCATGGACCCTTGCATGTAACGC
Internal bar code:GGGTGCGCATGAATTCCGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1885
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGCGGGCTAGACATATG
Suggested primer 2:TGGTAGGGATGACCAGGAGG