Insertion junction: CLIP2.060690_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060690
Chromosome:chromosome 7
Location:3535534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336350 (1 of 1) PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGTTTACCTTAGTCATACGGTATCCCATGAGTCAGCATACCGCTCCT
Internal bar code:ACTGAGACTTTGAGCCGGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1805
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTAGGGATGACCAGGAGG
Suggested primer 2:ACGTGCGGGCTAGACATATG