Insertion junction: CLIP2.060694_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060694
Chromosome:chromosome 7
Location:4084841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340750 EXN11 RNaseT, SDN2 homolog; (1 of 1) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED 5'UTR
Cre07.g342950 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTTACGGGCTCGTAGCCCTGCACCTCAGCTCCTCCGCCCTGCATCTC
Internal bar code:CGGGAAGCCTCTTACGGTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1288
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGCGTTCTGTGTGTGGA
Suggested primer 2:GCCTTTCCCGATACCCGTAG