Insertion junction: CLIP2.060696_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060696
Chromosome:chromosome 3
Location:3166966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164950 SRS3 Serine/arginine-rich pre-mRNA splicing factor; (1 of 5) IPR000504//IPR012677 - RNA recognition motif domain // Nucleotide-binding alpha-beta plait domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCAGCAGCCCGCAACCAACCACCACCGCGCCGTAACGCCGCGCTCAC
Internal bar code:GGCCATATTGCGCTTGTCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1963
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTAACTTCGTGCCCCAC
Suggested primer 2:AGTCTGGGGTCATAGGGGAC