Insertion junction: CLIP2.060696_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060696
Chromosome:chromosome 3
Location:3166987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164950 SRS3 Serine/arginine-rich pre-mRNA splicing factor; (1 of 5) IPR000504//IPR012677 - RNA recognition motif domain // Nucleotide-binding alpha-beta plait domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCCCAGGGAAGCTGGAGACCCGGAAAGTTGGCTTGGTGTTGATGTGA
Internal bar code:GGCCATATTGCGCTTGTCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2190
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTGGGGTCATAGGGGAC
Suggested primer 2:TGAGTAACTTCGTGCCCCAC