Insertion junction: CLIP2.060700_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060700
Chromosome:chromosome 11
Location:2143702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467742 (1 of 3) PF04434 - SWIM zinc finger (SWIM) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTTAGCCAAGTCAGCTGACTCGTGTATTTAAAGCTATTATGTCCTGC
Internal bar code:CCTATTACTAGCTTGTAGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGGGTGGATGGGAGTGA
Suggested primer 2:TTGCCGACGACGAACTTACA