Insertion junction: CLIP2.060701_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060701
Chromosome:chromosome 2
Location:4116466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103550 EIF1A Eukaryotic translation initiation factor 1A, eIF-1A; (1 of 1) K03236 - translation initiation factor 1A (EIF1A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCTGCAATCCTGCGGACCACTTGTTACGCGGCGGCTCATTGTGGAGC
Internal bar code:AAGCCGTTGTTTGAAGGGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1002
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAGGCAACCCTGAACACG
Suggested primer 2:ACTTCGACGACATTGCAGGT