Insertion junction: CLIP2.060703_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060703
Chromosome:chromosome 12
Location:4190460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517900 SCA1,SECA1 (1 of 1) K03070 - preprotein translocase subunit SecA (secA); Chloroplast-associated SecA protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGTCGTCGTTATACAGTTGCTTGATTGGCCTTTGCGTTTGCCATCA
Internal bar code:GAGCAGATGAACTCAGTAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1554
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTGTGTACGC
Suggested primer 2:GTTGGGGAGCATTTGGAGGA