Insertion junction: CLIP2.060708_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060708
Chromosome:chromosome 16
Location:7564449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683707 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCCACACAAAAAAGAAACTACAACTCTTATCACTATGGCGTCTTTGT
Internal bar code:GTAAGACGATAAGAGAAACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2313
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGACTCTCACCCGTTTTCCG
Suggested primer 2:CCCAACAGCCTACCTGCTAC