Insertion junction: CLIP2.060709_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060709
Chromosome:chromosome 13
Location:2121206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577400 ELG16 (1 of 1) IPR000742//IPR004263//IPR009030//IPR013111 - EGF-like domain // Exostosin-like // Insulin-like growth factor binding protein, N-terminal // EGF-like domain, extracellular; Exostosin-like glycosyltransferase 16 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTCAGCATCACGTCGGGCTAGGGATGCCTCGCGACCGTTTGCGCCTG
Internal bar code:ATTGATCATATTAGTAGCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:968
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACCAGCAGAGGTACGTG
Suggested primer 2:GGCTGATACCAGGGCAAGTT