Insertion junction: CLIP2.060712_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060712
Chromosome:chromosome 16
Location:7731658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686734 (1 of 30) PTHR24349//PTHR24349:SF79 - SERINE/THREONINE-PROTEIN KINASE // NITROGEN NETWORK KINASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGATCGGCGGATGCTATCCGGGACATAACTGGTTGTGTGTGGTTACAA
Internal bar code:TACAGTCTGCGCGAACCGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3177
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAAACGGTGCAGCAGTG
Suggested primer 2:CCAAGCAGGATGTGGAGTGT