Insertion junction: CLIP2.060713_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060713
Chromosome:chromosome 6
Location:7283984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299150 PHC9,PHC26 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 26 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAATCCGTCGTCCCCACTGTCGGGCGGACATAATCAAGCCCAGCCCCA
Internal bar code:ATACGTGGGCGGTATACGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2934
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATCCTGGCATGACTGT
Suggested primer 2:GGCGCGAAACTTTTCCTGTT