Insertion junction: CLIP2.060713_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060713
Chromosome:chromosome 6
Location:7283985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299150 PHC9,PHC26 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 26 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACGGAGTGGATGGTGCATTGGGCATCTACCTCCGGACCTGTGCGTGAC
Internal bar code:ATACGTGGGCGGTATACGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCGAAACTTTTCCTGTT
Suggested primer 2:CCCAATCCTGGCATGACTGT