Insertion junction: CLIP2.060715_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060715
Chromosome:chromosome 17
Location:2107907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802047 (1 of 14) IPR002156//IPR012337 - Ribonuclease H domain // Ribonuclease H-like domain 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTGACGCAGGCAAAACTGGCTGGTTCAGTAGACTTGGTACCTAGTT
Internal bar code:TTATCCCTGATCTAAGCTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2719
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCCGGTATCTGGTTTG
Suggested primer 2:AACTCGTCCACGTACACCAC