Insertion junction: CLIP2.060719_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060719
Chromosome:chromosome 16
Location:185182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695050 ECH3,HCD1 (1 of 1) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA epimerase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase; Enoyl-CoA hydratase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTACGTCGCTGCGGCAGACAATCGAGTGATCGACCAGCTCACGCCTT
Internal bar code:TGTTTTAATGTGTGACAGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAAATAGGGGCGGAAAGGGG
Suggested primer 2:CTGACGCGCATTCATCACTG