Insertion junction: CLIP2.060725_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060725
Chromosome:chromosome 16
Location:6996577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g802000 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCCCTATTACTGTGGGGGCATGTCGCAACCGTGGAGGGCACTGTAAG
Internal bar code:GATAAAAGTAATTCGTGGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3736
LEAP-Seq percent confirming:77.0833
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGCCCTGTGCTTTTG
Suggested primer 2:GGGTAAAGGGGGAGTTGGTG