Insertion junction: CLIP2.060726_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060726
Chromosome:chromosome 1
Location:6984249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049826 PHC59 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTCGGGGTGGATCCATGGACGGATGTACATTGGCAGCAAGAATGTTG
Internal bar code:ATCGGCGTTTACGTAAGGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGCTCACCACCTTGTA
Suggested primer 2:AAATGCTTGACACCAACCGC