Insertion junction: CLIP2.060727_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060727
Chromosome:chromosome 9
Location:2598316
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g392400 SEC24C (1 of 15) IPR011053 - Single hybrid motif; COP-II coat subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGCCACACCTAGCTGCTTCAACGCACCTGTCCTCACATCCCACAAA
Internal bar code:GCAGGCGCCATAGAAGCCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1105
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGCCTGGCATATACTG
Suggested primer 2:GACAGTGTGCGTGTGTGTTC