Insertion junction: CLIP2.060731_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060731
Chromosome:chromosome 5
Location:1043723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247600 UBC2 (1 of 1) PTHR24067//PTHR24067:SF46 - UBIQUITIN-CONJUGATING ENZYME E2 // LD28904P; E2 Ubiquitin conjugating enzyme outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTTGGAAGGCCAGTCAGTGACTCCTGGACCATTAGGCAACATATACA
Internal bar code:TGAGTCTTGCAAGAATGATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACGCGGCACACAAACAG
Suggested primer 2:AGAAAGGCCCAGAATGTCGG