Insertion junction: CLIP2.060731_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060731
Chromosome:chromosome 5
Location:1043730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247600 UBC2 (1 of 1) PTHR24067//PTHR24067:SF46 - UBIQUITIN-CONJUGATING ENZYME E2 // LD28904P; E2 Ubiquitin conjugating enzyme outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCTAATCCTGCCTACGGCTTGCCTTCCGGTACACACCTTGCGCTGCC
Internal bar code:TGAGTCTTGCAAGAATGATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5299
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAAGGCCCAGAATGTCGG
Suggested primer 2:TAAACGCGGCACACAAACAG