Insertion junction: CLIP2.060733_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060733
Chromosome:chromosome 12
Location:1365422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489000 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) outside_mRNA
Cre12.g489050 PCT2,CDS2 Phosphatidate cytidylyltransferase; (1 of 1) PTHR13773:SF3 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCCGAGCGGGTAGAGCGGATGCCGGTGAGATGAGCTGCTGTTTGACG
Internal bar code:GATCGAATGGCTTAGGCTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5613
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCTTGCTACGTCCACAC
Suggested primer 2:GCCCTTCCTCAATGTGCTCT