Insertion junction: CLIP2.060737_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060737
Chromosome:chromosome 12
Location:7251418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558800 (1 of 2) IPR000104//IPR017923 - Antifreeze protein, type I // Transcription factor IIS, N-terminal outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTGGGGGCAAGCACGGGACATCAATGTCATCGCGTATGGCAAGGAAA
Internal bar code:CGGAACTGGGCACATTGGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGGATGGGGTGGAAGG
Suggested primer 2:CGCGGCAGCCTTTGATTAAA