Insertion junction: CLIP2.060737_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060737
Chromosome:chromosome 12
Location:7251424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558800 (1 of 2) IPR000104//IPR017923 - Antifreeze protein, type I // Transcription factor IIS, N-terminal outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACCGGTCATGTCGCAATCTCTCTGGCTCTATCGGGGGGCCTCCGCTC
Internal bar code:TTAACATTATTATCAGGTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2452
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCAGCCTTTGATTAAA
Suggested primer 2:GAAAGGGATGGGGTGGAAGG