Insertion junction: CLIP2.060738_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060738
Chromosome:chromosome 3
Location:7294898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207150 (1 of 1) 1.13.12.3 - Tryptophan 2-monooxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATTCCCTTCACTGTCATCCTTACCGCATCTCCGCGATAACACACCTA
Internal bar code:GTGGTTTTGAGATTATCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:872
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTTCCCACACTGATGA
Suggested primer 2:GAAGGCATTACAAGCGAGCG