Insertion junction: CLIP2.060739_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060739
Chromosome:chromosome 12
Location:8623193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548250 (1 of 1) K13216 - nuclear inhibitor of protein phosphatase 1 [EC:3.1.4.-] (PPP1R8, NIPP1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGCATTGGAAAGGCTGAAGCAGTCGCATTGGAATGGGATGGTCGTGAC
Internal bar code:AGAATACAGCATTATTGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCATACACCGTTGGCGA
Suggested primer 2:CACTTGAAAGCGGCGTTCAA