Insertion junction: CLIP2.060739_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060739
Chromosome:chromosome 12
Location:8623201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548250 (1 of 1) K13216 - nuclear inhibitor of protein phosphatase 1 [EC:3.1.4.-] (PPP1R8, NIPP1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCACTGCTTCTTCTATCTATAATATTTGAGCACTTAAGCCCAATCAA
Internal bar code:AGAATACAGCATTATTGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3340
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTGAAAGCGGCGTTCAA
Suggested primer 2:TTTCCATACACCGTTGGCGA