Insertion junction: CLIP2.060755_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060755
Chromosome:chromosome 3
Location:833338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146367 (1 of 3) PTHR11697:SF74 - WITHOUT CHILDREN, ISOFORM B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATGTATACAACCCTGCGGAACATGTGGCTTTTGCCGTCTATCCTGCT
Internal bar code:TCACATGGGCGTCGGCCGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3810
LEAP-Seq percent confirming:31.4815
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAACAGCTGTTCGCAAGC
Suggested primer 2:ACTCGGACTTCAACGGGAAC