Insertion junction: CLIP2.060756_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060756
Chromosome:chromosome 1
Location:4865527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033900 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGAGGCGAAAAACCGGTGACGCGCCCGCTCTGCCGTGGAGGGATGC
Internal bar code:CGTCGGTAAGGTGTTCGCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1820
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGAGGTGTGTGCGTACA
Suggested primer 2:CTATGCAGTCCTACCAGCCG