Insertion junction: CLIP2.060766_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060766
Chromosome:chromosome 2
Location:5158020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111850 (1 of 5) PF00536 - SAM domain (Sterile alpha motif) (SAM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGCAAACAAACACTGCCGACCAGCGGGGTGGGTGCCTTGCTACATAT
Internal bar code:TAGACGTTTAACTTCAGGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3550
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTAGGGATGGTGTCGTA
Suggested primer 2:GCTCACAAGTTCCCTCTGCT