Insertion junction: CLIP2.060781_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060781
Chromosome:chromosome 13
Location:3721303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801563 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAACGCCCAACTAACGCCAGCAACTCGTCGGTACAGTAACTCCGGCGT
Internal bar code:TGACTAATTATCTCAGCTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1907
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTACAGTGCAGTCCGT
Suggested primer 2:GGGCGGGATGAGATGTACAG