Insertion junction: CLIP2.060782_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060782
Chromosome:chromosome 6
Location:6610239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294600 (1 of 3) PF15227 - zinc finger of C3HC4-type, RING (zf-C3HC4_4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGTAGCCCCAGCTCGTCATCATGTCCTTTTACGGCGTTCCTGCTACA
Internal bar code:CAGCGGCGGCTGATATAATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1618
LEAP-Seq percent confirming:87.8505
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGATAGCGAGCTTAGCAA
Suggested primer 2:TTGCTTGAGGACAGAGCCTG