Insertion junction: CLIP2.060786_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060786
Chromosome:chromosome 2
Location:2172113
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g089450 HRP5 Hydroxyproline-rich glycoprotein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCACACGCCCAACCTTCCGGTTGGGCTCCGGTAAACCGTGACAGTGAT
Internal bar code:GGATTTCCGGGGTGTTGGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:682
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGATGCTTAGCCACACC
Suggested primer 2:ATCATCTCTCTGGCCCAGGT