Insertion junction: CLIP2.060799_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060799
Chromosome:chromosome 3
Location:1832565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154300 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCTGCACGCTGGCGAAAACTAGGGTTCCAACAGAAAACCTGTGTGTA
Internal bar code:AATTCATTGGATACTCGAACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3013
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCATGAACATTGCGGCAA
Suggested primer 2:GGGTTTCCTAAGTGGGGCTC