Insertion junction: CLIP2.060808_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060808
Chromosome:chromosome 3
Location:6071113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190200 (1 of 1) IPR012351 - Four-helical cytokine, core 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCACAGTTCAGTGCACATAGGCCACCGGCTCTGATGTCACAGAGCAC
Internal bar code:GCGACCTCATCTGGTGAATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3157
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCATCCCGTCAACTCACA
Suggested primer 2:TCTGCAAAGTTTCGCCGTTG