Insertion junction: CLIP2.060812_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060812
Chromosome:chromosome 7
Location:1322436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCTCGGCGGGCCTGGACGTCCTGGTAGGCCTGCGCCGCCTGCAGCAC
Internal bar code:TCGCCACTCGGTGGCGTGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4507
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGTTGGTTACGGCTGT
Suggested primer 2:TCTCCCGGACCTCCTAACAG