Insertion junction: CLIP2.060814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060814
Chromosome:chromosome 13
Location:3807221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAACATTGGCTAACCGATGTTGACGGCCCCAAGGTTGGAGGGCGAAC
Internal bar code:AGTCCGGTGCGGCATACCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2803
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGGCGGGTGAATTTTGG
Suggested primer 2:GTCAGGCCAGGTGTTGCTAT