Insertion junction: CLIP2.060818_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060818
Chromosome:chromosome 12
Location:2265809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508500 (1 of 2) 3.4.17.4 - Gly-Xaa carboxypeptidase / Glycine carboxypeptidase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGTCCAACATCGAAAAAAGGCTATGATCAAGTAGCCTTCTTCCGTAT
Internal bar code:CATGTTGATCTCGAAACTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2713
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCCCGTCGGCAATTAAT
Suggested primer 2:TTGCTTTCAACGCTTGTCCG