Insertion junction: CLIP2.060818_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060818
Chromosome:chromosome 12
Location:6620669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538900 (1 of 25) PTHR10516 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGAAGCGAATGTACCATTGCATCACAAGGCGAAATGAAAACCCAATCA
Internal bar code:CAGTCCAAAATCGGCTTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3650
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCCGTACTGTTCGTGA
Suggested primer 2:CCCAGATAACTGCGCCGTAT