Insertion junction: CLIP2.060818_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060818
Chromosome:chromosome 12
Location:6620670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538900 (1 of 25) PTHR10516 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTGGCCTAGTATGTTGGTCTGCTCGTTCACTCGCGCCGTAGCATAT
Internal bar code:CAGTCCAAAATCGGCTTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2099
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGATAACTGCGCCGTAT
Suggested primer 2:CCAACCCGTACTGTTCGTGA