Insertion junction: CLIP2.060822_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060822
Chromosome:mitogenome
Location:10636
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreMt.g802343 ChrepMp07,nad1,801499 NADH dehydrogenase subunit 1; (1 of 1) K03878 - NADH-ubiquinone oxidoreductase chain 1 (ND1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCATCGGAAATGCAAATGCCAACCCAAGCGACTTGGCTTAGTACAAA
Internal bar code:TGCGTTAAGGGCAGATTAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:75
LEAP-Seq percent confirming:2.77778
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGGCCACGGTTCTTATG
Suggested primer 2:CGCGAGTCCATACAAAAGCG