Insertion junction: CLIP2.060829_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060829
Chromosome:chromosome 11
Location:1916118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801286 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATCCTTGTTCCCGACCAAGCGTGAGCCGCTCCAGTCCACCGGTGTGC
Internal bar code:TAGTTGGCCTATTTACGCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1558
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAGTGCTTGAATTGGGG
Suggested primer 2:ATCTTGGGAATGCTGCAGCT