Insertion junction: CLIP2.060837_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060837
Chromosome:chromosome 17
Location:463139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698950 (1 of 1) K09140 - pre-rRNA-processing protein TSR3 (TSR3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCACCCACCACGTGCACACAACCGCCAGTCCACCGCTGGTCACAGCC
Internal bar code:TAATGACTCTAATGAATGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1072
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTTGCTGTCGCTCTAC
Suggested primer 2:ATGAGCCGAAAGTGTGAGGG