Insertion junction: CLIP2.060872_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060872
Chromosome:chromosome 3
Location:2142055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156850 (1 of 15) IPR029061 - Thiamin diphosphate-binding fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCTAGAATGTGGAGCAGGCGTCATTCGATTCTAGTTCTCCTAATTT
Internal bar code:GTGGCAGCTATTCTACTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1590
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACCTGT
Suggested primer 2:TGGAACAACATGAGCTGCCA