Insertion junction: CLIP2.060875_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060875
Chromosome:chromosome 17
Location:2484685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715421 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGTTACGTTTGGGTCTGGTACTTACAACTCCAGCTTGGTAGTAACCC
Internal bar code:CGACTCTGAGTTATTTTCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4122
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCACGGATTCGCAATTCC
Suggested primer 2:ATCCGAGATCACGTCATGGC