Insertion junction: CLIP2.060881_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060881
Chromosome:chromosome 12
Location:2866589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGGGTTGGGTACATTCCAGTACAAGCAGCCCAGGCGCAGACTGTGGT
Internal bar code:TGCTCCTATTTCCTTTCCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3504
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGACTGACTGCCTCAT
Suggested primer 2:CGTTATCAACCCAGCCACCT