Insertion junction: CLIP2.060882_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060882
Chromosome:chromosome 11
Location:786378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467633 (1 of 1) PTHR11918//PTHR11918:SF78 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAAGCGTAGGATAACGAGGAGGGCTCTGCACAGGGCGGGCCTTTCGG
Internal bar code:TCTCGGCGTATACCGTAAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3293
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTTGACAGGTGGCACAA
Suggested primer 2:AGCTGGTCTACTTTGACGGC