Insertion junction: CLIP2.060887_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060887
Chromosome:chromosome 10
Location:4911462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453766 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGATGGTTTCCCCGCGAGAGCTATCCTGCTTTCTAGAAGCCGGTCT
Internal bar code:TCTGTGACCCCCGTCTGTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4541
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATGGGGTAGGGCAAGTA
Suggested primer 2:GTGCATCTGCTTTGACCAGC