Insertion junction: CLIP2.060891_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060891
Chromosome:chromosome 3
Location:3797301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169750 FAP371 Flagellar Associated Protein 371 3'UTR
Cre03.g169800 (1 of 2) PTHR10060:SF22 - CELL DEATH-RELATED NUCLEASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGGAACTTGTGTATTGCGAATTGAAAACTGCTATTACAGAGGTCGGA
Internal bar code:GCCAGTTTCGCCTGGGAGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2005
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGCTATCCCACCATGAC
Suggested primer 2:CCTCGGCATTAGGGGGTTTT