Insertion junction: CLIP2.060899_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060899
Chromosome:chromosome 16
Location:3696430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679876 (1 of 1) PTHR15859//PTHR15859:SF4 - SETA BINDING PROTEIN 1 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTCCCCCGCACCAACTGCCCACCCGCAGCAACCAAACTGCAAGCTAT
Internal bar code:TATAACACTTGAGACTGGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1958
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCTGAGCCTGACCAATT
Suggested primer 2:GTCAACCGTGTGAAACCGTG