Insertion junction: CLIP2.060902_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060902
Chromosome:chromosome 12
Location:4476354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520400 uL4m,MRPL4 Mitochondrial ribosomal protein L4; (1 of 2) K02926 - large subunit ribosomal protein L4 (RP-L4, MRPL4, rplD) 3'UTR
Cre12.g520450 SGT1 Serine O-galactosyltransferase 1; (1 of 1) PTHR31485:SF7 - PEPTIDYL SERINE ALPHA-GALACTOSYLTRANSFERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACACCAACAGCCATTCTGCTCAATAGCAGCGCTTGCAGCGCGTTTCT
Internal bar code:CCCGGGGATGCGCCTCATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5180
LEAP-Seq percent confirming:99.2857
LEAP-Seq n confirming:139
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAGAACATCCGCGTCGT
Suggested primer 2:GCTGCCGCTATCTCTTGCTA